There's so much missing from MSI that it compounds on the issue of the system ranking friendlies as the priority 1 trackfile. Right now it's only considering the radar trackfiles in the ranking when it should be all sources including C2 donations. If we had this a friendly would pretty much never be ranked #1 unless there's literally only friendlies to rank.
You shouldn't be using TWS as the primary mode anyway. The system is going to automatically switch from RWS to TWS on the first amraam shot and then you're fighting the remainder of the engagement in TWS.(we still need this too)
bottom line tho, it is correct that friendlies are counted in the MSI threat matrix and will be ranked accordingly, they are just at the bottom of the list. The problem is that threat matrix is wrong, on top of all the other features of MSI not being present contributing to it. Hopefully it won't take 6 years to at least fix that matrix.